Exploring the Gut-Brain Axis in Autism Spectrum Disorder: A Cross-Sectional Correlational Study of Microbiome Diversity and Neurobehavioral Severity in Children

Main Article Content

Dr. Muhammad Mohsin Shoukat
Seerat Husnain
Dr. Farkhunda Naz
Muzafar Ali
Muhammad Hassan Khan
Zainab Mufaddal Adeeb

Abstract

Background: Autism Spectrum Disorder is a heterogeneous neurodevelopmental condition frequently accompanied by gastrointestinal symptoms and altered dietary patterns. Emerging evidence suggests that gut microbial imbalance may influence neurobehavioral expression through the microbiota–gut–brain axis, but data from Pakistan remain limited. Objective: To examine the association between gut microbiota diversity, selected bacterial genera, gastrointestinal symptom burden, and behavioral severity among children with Autism Spectrum Disorder attending a tertiary care hospital in Punjab, Pakistan. Methods: This cross-sectional correlational study included 100 children aged 3–12 years with clinically confirmed Autism Spectrum Disorder recruited through consecutive sampling. Demographic and clinical data were collected using a structured proforma, behavioral severity was assessed using a standardized autism severity rating tool, gastrointestinal symptoms were recorded through parent report, and stool samples were analyzed using 16S rRNA-based microbiome profiling. Alpha diversity, observed species richness, and relative abundance of selected bacterial genera were examined in relation to behavioral and gastrointestinal variables. Results: The mean age was 7.2 ± 2.4 years, and 72% were male. Gastrointestinal symptoms were present in 68% of children. Mean Shannon diversity declined from 4.2 ± 0.5 in mild ASD to 3.1 ± 0.7 in severe ASD. Shannon diversity was negatively correlated with total behavioral severity score (r = −0.41, p = 0.001) and gastrointestinal symptom burden (r = −0.39, p = 0.002). Children with gastrointestinal symptoms had lower microbial diversity and higher behavioral severity than those without gastrointestinal symptoms. Conclusion: Reduced gut microbial diversity and altered bacterial composition were associated with greater behavioral severity and gastrointestinal symptom burden in children with Autism Spectrum Disorder. These findings support the clinical relevance of the microbiota–gut–brain axis but require confirmation through longitudinal multicenter studies.

Article Details

Section

Articles

How to Cite

1.
Dr. Muhammad Mohsin Shoukat, Seerat Husnain, Dr. Farkhunda Naz, Muzafar Ali, Muhammad Hassan Khan, Zainab Mufaddal Adeeb. Exploring the Gut-Brain Axis in Autism Spectrum Disorder: A Cross-Sectional Correlational Study of Microbiome Diversity and Neurobehavioral Severity in Children. JHWCR [Internet]. 2026 Apr. 30 [cited 2026 May 1];4(8):1-10. Available from: https://jhwcr.com/index.php/jhwcr/article/view/1475

References

1. Frank DN, et al. Multi-level analysis of the gut–brain axis shows autism spectrum disorder-associated molecular and microbial profiles. Nat Neurosci. 2023;26:1208–1217. doi:10.1038/s41593-023-01361-0.

2. Li Q, Han Y, Dy ABC, Hagerman RJ. Microbiota-gut-brain axis in autism spectrum disorder. J Genet Genomics. 2021. doi:10.1016/j.jgg.2021.07.001.

3. Fouquier J, Huizar NM, Donnelly J, Glickman C, Kang DW, Maldonado J, et al. The gut microbiome in autism: study-site effects and longitudinal analysis of behavior change. mSystems. 2021;6(2):e00848-20. doi:10.1128/mSystems.00848-20.

4. Su Q, Wong OWH, Lu W, Wan Y, Zhang L, Xu W, et al. Multikingdom and functional gut microbiota markers for autism spectrum disorder. Nat Microbiol. 2024. doi:10.1038/s41564-024-01739-1.

5. Xu M, Xu X, Li J, Li F. Association between gut microbiota and autism spectrum disorder: a systematic review and meta-analysis. Front Psychiatry. 2019;10:473. doi:10.3389/fpsyt.2019.00473.

6. Korteniemi J, Karlsson L, Aatsinki A. Systematic review: autism spectrum disorder and the gut microbiota. Acta Psychiatr Scand. 2023;148(3):242–254. doi:10.1111/acps.13587.

7. Bezawada N, Phang TH, Hold GL, Hansen R. Autism spectrum disorder and the gut microbiota in children: a systematic review. Ann Nutr Metab. 2020;76(1):16–29. doi:10.1159/000505363.

8. Levkova M, Chervenkov T, Pancheva R. Genus-level analysis of gut microbiota in children with autism spectrum disorder: a mini review. Children. 2023;10(7):1103. doi:10.3390/children10071103.

9. Hsiao EY, McBride SW, Hsien S, Sharon G, Hyde ER, McCue T, et al. Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders. Cell. 2013;155(7):1451–1463. doi:10.1016/j.cell.2013.11.024.

10. Sharon G, Cruz NJ, Kang DW, Gandal MJ, Wang B, Kim YM, et al. Human gut microbiota from autism spectrum disorder promote behavioral symptoms in mice. Cell. 2019;177(6). doi:10.1016/j.cell.2019.05.004.

11. Vuong HE, Yano JM, Fung TC, Hsiao EY. The microbiome and host behavior. Annu Rev Neurosci. 2017;40:21–49. doi:10.1146/annurev-neuro-072116-031347.

12. Mayer EA, Tillisch K, Gupta A. Gut/brain axis and the microbiota. J Clin Invest. 2015;125(3):926–938. doi:10.1172/JCI76304.

13. Valdes AM, Walter J, Segal E, Spector TD. Role of the gut microbiota in nutrition and health. BMJ. 2018;361:k2179. doi:10.1136/bmj.k2179.

14. Valles-Colomer M, Falony G, Darzi Y, Tigchelaar EF, Wang J, Tito RY, et al. The neuroactive potential of the human gut microbiota in quality of life and depression. Nat Microbiol. 2019;4:623–632. doi:10.1038/s41564-018-0337-x.

15. Fung TC, Vuong HE, Luna CDG, Pronovost GN, Aleksandrova AA, Riley NG, et al. Intestinal serotonin and fluoxetine exposure modulate bacterial colonization in the gut. Nat Microbiol. 2019;4(12):2064–2073. doi:10.1038/s41564-019-0540-4.

16. Kang DW, Park JG, Ilhan ZE, Wallstrom G, LaBaer J, Adams JB, Krajmalnik-Brown R. Reduced incidence of Prevotella and other fermenters in intestinal microflora of autistic children. PLoS One. 2013;8(7):e68322. doi:10.1371/journal.pone.0068322.

17. Kang DW, Adams JB, Gregory AC, Borody T, Chittick L, Fasano A, et al. Microbiota transfer therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study. Microbiome. 2017;5(1):10. doi:10.1186/s40168-016-0225-7.

18. Strati F, Cavalieri D, Albanese D, De Felice C, Donati C, Hayek J, et al. New evidences on the altered gut microbiota in autism spectrum disorders. Microbiome. 2017;5(1):24. doi:10.1186/s40168-017-0242-1.

19. Coretti L, Paparo L, Riccio MP, Amato F, Cuomo M, Natale A, et al. Gut microbiota features in young children with autism spectrum disorders. Front Microbiol. 2018;9:3146. doi:10.3389/fmicb.2018.03146.

20. Liu S, Li E, Sun Z, Fu D, Duan G, Jiang M, et al. Altered gut microbiota and short chain fatty acids in Chinese children with autism spectrum disorder. Sci Rep. 2019;9:287. doi:10.1038/s41598-018-36430-z.

21. Wang M, Wan J, Rong H, He F, Wang H, Zhou J, et al. Alterations in gut glutamate metabolism associated with changes in gut microbiota composition in children with autism spectrum disorder. mSystems. 2019;4(1):e00321-18. doi:10.1128/mSystems.00321-18.

22. Ma B, Liang J, Dai M, Wang J, Luo J, Zhang Z, Jing J. Altered gut microbiota in Chinese children with autism spectrum disorders. Front Cell Infect Microbiol. 2019;9:40. doi:10.3389/fcimb.2019.00040.

23. Mielewska-Pawłowicz Z, Figlerowicz M, et al. Microbiota in autism spectrum disorder: a systematic review. Int J Mol Sci. 2023;24(23):16660. doi:10.3390/ijms242316660.

24. Yu R, Hafeez R, Ibrahim M, Alonazi WB, Li B. The complex interplay between autism spectrum disorder and gut microbiota in children: a comprehensive review. Behav Brain Res. 2024;473:115177. doi:10.1016/j.bbr.2024.115177.

25. Biagioli V, Matera M, Cavecchia I, Di Pierro F, Zerbinati N, Striano P. Gut microbiota and autism: unlocking connections. Nutrients. 2025;17(23):3706. doi:10.3390/nu17233706.